4GKI
Crystal structure of the aminoglycoside phosphotransferase APH(3')-Ia, with substrate kanamycin and small molecule inhibitor 1-NM-PP1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Aminoglycoside 3'-phosphotransferase AphA1-IAB | polymer | 272 | 31350.4 | 12 | UniProt (B0VD92) | Acinetobacter baumannii | |
| 2 | BC, EB, HA, KB, M... (L, H, D, I, A...) | KANAMYCIN A | non-polymer | 484.5 | 12 | Chemie (KAN) PubChem (16397788) | |||
| 3 | AA, CC, FB, IA, LB... (C, L, H, D, I...) | 1-tert-butyl-3-(naphthalen-1-ylmethyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine | non-polymer | 331.4 | 12 | Chemie (0JN) PubChem (5154691) | |||
| 4 | AB, BA, BB, CA, DC... (G, C, L, H, D...) | SODIUM ION | non-polymer | 23.0 | 14 | Chemie (NA) PubChem (923) | |||
| 5 | Q (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) PubChem (312) | |||
| 6 | AC, CB, DA, DB, EA... (K, G, C, L, H...) | ACETATE ION | non-polymer | 59.0 | 28 | Chemie (ACT) PubChem (175) | |||
| 7 | NB, U, UB, VB, WB... (I, A, J, B) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 6 | Chemie (PEG) PubChem (8117) | |||
| 8 | HC, IC, JC, KC, LC... (A, B, C, D, E...) | water | water | 18.0 | 3308 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L: 1 - 271 (UniProt: B0VD92)
| PDB | External Database | Details |
|---|---|---|
| Gly 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 376204.8 | |
| Non-Polymers* | Number of molecules | 73 |
| Total formula weight | 12438.2 | |
| All* | Total formula weight | 388643.1 |
