4GAZ
Crystal Structure of a Jumonji Domain-containing Protein JMJD5
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Lysine-specific demethylase 8 | polymer | 252 | 29333.2 | 2 | UniProt (Q8N371) Pfam (PF13621) | Homo sapiens (human) | JmjC domain-containing protein 5, Jumonji domain-containing protein 5 |
| 2 | C, E (A, B) | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) | |||
| 3 | D, F (A, B) | N-OXALYLGLYCINE | non-polymer | 147.1 | 2 | Chemie (OGA) | |||
| 4 | G, H (A, B) | water | water | 18.0 | 17 | Chemie (HOH) |
Sequence modifications
A, B: 176 - 416 (UniProt: Q8N371)
| PDB | External Database | Details |
|---|---|---|
| Met 173 | - | expression tag |
| Gly 174 | - | expression tag |
| Ser 175 | - | expression tag |
| Leu 417 | - | expression tag |
| Glu 418 | - | expression tag |
| His 419 | - | expression tag |
| His 420 | - | expression tag |
| His 421 | - | expression tag |
| His 422 | - | expression tag |
| His 423 | - | expression tag |
| His 424 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 58666.5 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 411.6 | |
| All* | Total formula weight | 59078.0 |






