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4FYD

Crystal structure of yeast DNA polymerase alpha bound to DNA/RNA and dGTP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BDNA polymerase alpha catalytic subunit Apolymer910103401.72UniProt (P13382)
Pfam (PF03104)
Pfam (PF00136)
In PDB
Saccharomyces cerevisiae (Baker's yeast)
2C, DDNA (5'-D(*TP*GP*AP*GP*CP*GP*TP*G*TP*GP*TP*AP*CP*CP*CP*CP*TP*GP*CP*CP*CP*GP*CP*CP*G)-3')polymer257627.92
3E, FDNA/RNA (5'-R(*CP*GP*GP*CP*GP*GP*GP*CP*AP*G)-D(P*GP*G)-3')polymer123929.42
4A, B2'-DEOXYGUANOSINE-5'-TRIPHOSPHATEnon-polymer507.22Chemie (DGT)
Sequence modifications
A, B: 349 - 1258 (UniProt: P13382)
PDBExternal DatabaseDetails
Ala 508Arg 508engineered mutation
Ala 509Asn 509engineered mutation
Asn 998Asp 998engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight229918.1
Non-Polymers*Number of molecules2
Total formula weight1014.4
All*Total formula weight230932.4
*Water molecules are not included.

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PDB entries from 2024-07-24

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