4FMK
Crystal structure of mouse nectin-2 extracellular fragment D1-D2
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Poliovirus receptor-related protein 2 | polymer | 225 | 24920.1 | 1 | UniProt (P32507) Pfam (PF07686) Pfam (PF08205) | Mus musculus (mouse) | Nectin-2, Herpes virus entry mediator B, Herpesvirus entry mediator B, HveB, Murine herpes virus entry protein B, mHveB, Poliovirus receptor homolog |
| 2 | B (B) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1057.0 | 1 | In PDB GlyTouCan (G82348BZ) | |||
| 3 | C (C) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 894.8 | 1 | In PDB GlyTouCan (G42466VF) | |||
| 4 | D, E, F, G (A) | CADMIUM ION | non-polymer | 112.4 | 4 | Chemie (CD) | |||
| 5 | H (A) | water | water | 18.0 | 36 | Chemie (HOH) |
Sequence modifications
A: 32 - 250 (UniProt: P32507)
| PDB | External Database | Details |
|---|---|---|
| His 251 | - | expression tag |
| His 252 | - | expression tag |
| His 253 | - | expression tag |
| His 254 | - | expression tag |
| His 255 | - | expression tag |
| His 256 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 24920.1 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1951.8 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 449.6 | |
| All* | Total formula weight | 27321.5 |
