4FMB
VirA-Rab1 complex structure
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E (A, C, E) | Cysteine protease-like virA | polymer | 361 | 40140.2 | 3 | UniProt (Q7BU69) Pfam (PF06872) | Shigella flexneri | Effector protein virA |
| 2 | B, D, F (B, D, F) | Ras-related protein Rab-1A | polymer | 171 | 19385.0 | 3 | UniProt (P62820) Pfam (PF00071) | Homo sapiens (human) | YPT1-related protein |
| 3 | G, J, M (B, D, F) | ALUMINUM FLUORIDE | non-polymer | 84.0 | 3 | Chemie (AF3) PubChem (2124) | |||
| 4 | H, K, N (B, D, F) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 3 | Chemie (GDP) PubChem (136073927) PubChem (135398619) PubChem (135402030) PubChem (135431654) PubChem (135566337) PubChem (135760556) PubChem (136026707) PubChem (136053418) PubChem (136663964) PubChem (136664748) PubChem (136759848) PubChem (136759849) PubChem (136759850) PubChem (136836636) PubChem (136847074) PubChem (172898537) | |||
| 5 | I, L, O (B, D, F) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) PubChem (888) | |||
| 6 | P, Q, R, S, T (B, C, D, E, F) | water | water | 18.0 | 9 | Chemie (HOH) |
Sequence modifications
A, C, E: 45 - 400 (UniProt: Q7BU69)
B, D, F: 6 - 176 (UniProt: P62820)
| PDB | External Database | Details |
|---|---|---|
| Gly 40 | - | expression tag |
| Pro 41 | - | expression tag |
| Leu 42 | - | expression tag |
| Gly 43 | - | expression tag |
| Ser 44 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ala 10 | Tyr 10 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 178575.7 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1654.4 | |
| All* | Total formula weight | 180230.1 |
