4F86
Structure analysis of Geranyl diphosphate methyltransferase in complex with GPP and sinefungin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Geranyl diphosphate 2-C-methyltransferase | polymer | 320 | 35092.1 | 12 | UniProt (D3KYU3) | Streptomyces lasaliensis | SAM dependent methyltransferase, GPP methyltransferase |
| 2 | BA, EA, HA, KA, M... (F, G, H, I, A...) | SINEFUNGIN | non-polymer | 381.4 | 12 | Chemie (SFG) PubChem (176612030) PubChem (177116271) PubChem (25246236) PubChem (46875078) PubChem (46936257) PubChem (70602121) PubChem (456189) PubChem (4065234) PubChem (65482) PubChem (70789212) PubChem (93287274) PubChem (92403972) PubChem (93287270) PubChem (93287272) PubChem (93475589) PubChem (6917665) PubChem (12771338) PubChem (12771337) PubChem (131971033) PubChem (131972810) PubChem (138626357) PubChem (156562738) PubChem (162866891) PubChem (163339130) PubChem (168280605) | |||
| 3 | CA, FA, IA, LA, N... (F, G, H, I, A...) | GERANYL DIPHOSPHATE | non-polymer | 314.2 | 12 | Chemie (GPP) PubChem (734) PubChem (445995) PubChem (5280528) | |||
| 4 | AA, DA, GA, JA, MA... (E, F, G, H, I...) | MAGNESIUM ION | non-polymer | 24.3 | 12 | Chemie (MG) PubChem (888) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L: 1 - 300 (UniProt: D3KYU3)
| PDB | External Database | Details |
|---|---|---|
| Met -19 | - | expression tag |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 421104.8 | |
| Non-Polymers* | Number of molecules | 36 |
| Total formula weight | 8638.8 | |
| All* | Total formula weight | 429743.7 |
