4F2M
Crystal structure of a TGEV coronavirus Spike fragment in complex with the TGEV neutralizing monoclonal antibody 1AF10
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | monoclonal antibody 1AF10, heavy chain | polymer | 221 | 23643.4 | 2 | Mus musculus (mouse) | ||
2 | B, D | monoclonal antibody 1AF10, light chain | polymer | 214 | 23484.8 | 2 | Mus musculus (mouse) | ||
3 | E, F | Spike protein | polymer | 209 | 23191.0 | 2 | UniProt (Q0PKZ5) Pfam (PF01600) In PDB | TGEV virulent Purdue | |
4 | G, H, I, J | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
5 | B, D | ACETIC ACID | non-polymer | 60.1 | 2 | Chemie (ACY) | |||
6 | F | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
7 | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
E, F: 481 - 650 (UniProt: Q0PKZ5)
PDB | External Database | Details |
---|---|---|
Tyr 456 | - | expression tag |
Pro 457 | - | expression tag |
Tyr 458 | - | expression tag |
Asp 459 | - | expression tag |
Val 460 | - | expression tag |
Pro 461 | - | expression tag |
Asp 462 | - | expression tag |
Tyr 463 | - | expression tag |
Ala 464 | - | expression tag |
Gly 465 | - | expression tag |
Ala 466 | - | expression tag |
Gln 467 | - | expression tag |
Pro 468 | - | expression tag |
Ala 469 | - | expression tag |
Arg 470 | - | expression tag |
Ser 471 | - | expression tag |
Pro 472 | - | expression tag |
Gly 473 | - | expression tag |
Leu 474 | - | expression tag |
Val 475 | - | expression tag |
Pro 476 | - | expression tag |
Arg 477 | - | expression tag |
Gly 478 | - | expression tag |
Ser 479 | - | expression tag |
Arg 480 | - | expression tag |
Leu 651 | - | expression tag |
Val 652 | - | expression tag |
Pro 653 | - | expression tag |
Arg 654 | - | expression tag |
Gly 655 | - | expression tag |
Ser 656 | - | expression tag |
Asp 657 | - | expression tag |
Tyr 658 | - | expression tag |
Lys 659 | - | expression tag |
Asp 660 | - | expression tag |
Asp 661 | - | expression tag |
Asp 662 | - | expression tag |
Asp 663 | - | expression tag |
Lys 664 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 140638.4 | |
Branched | Number of molecules | 4 |
Total formula weight | 1697.6 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 341.3 | |
All* | Total formula weight | 142677.3 |