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4ELT

Snapshot of the large fragment of DNA polymerase I from Thermus Aquaticus processing modified pyrimidines

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase I, thermostablepolymer54060937.01UniProt (P19821)
Pfam (PF09281)
Pfam (PF00476)
Thermus aquaticusTaq polymerase 1
2B
(B)
DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3')polymer123617.41Synthetic DNA
3C
(C)
DNA (5'-D(*AP*AP*AP*AP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3')polymer164948.21Synthetic DNA
4D
(A)
2'-deoxy-5-[(4-ethynylphenyl)ethynyl]uridine 5'-(tetrahydrogen triphosphate)non-polymer592.31Chemie (0R5)
5E, F, T
(A, C)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
6G, I, J, L, M...
(A, B, C)
GLYCEROLnon-polymer92.19Chemie (GOL)
7H, K, O
(A)
ACETATE IONnon-polymer59.03Chemie (ACT)
8Q
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
9U, V, W
(A, B, C)
waterwater18.0245Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight69502.6
Non-Polymers*Number of molecules17
Total formula weight1733.2
All*Total formula weight71235.8
*Water molecules are not included.

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PDB entries from 2025-12-17

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