Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001882 | molecular_function | nucleoside binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0006281 | biological_process | DNA repair |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 27 |
Details | BINDING SITE FOR RESIDUE 0R5 A 901 |
Chain | Residue |
A | ARG573 |
A | ARG659 |
A | ARG660 |
A | LYS663 |
A | THR664 |
A | PHE667 |
A | ASP785 |
A | MG902 |
A | MG903 |
A | HOH1002 |
A | HOH1006 |
A | ARG587 |
A | HOH1056 |
A | HOH1066 |
A | HOH1067 |
A | HOH1084 |
A | HOH1115 |
B | DOC112 |
C | DA204 |
C | DG205 |
A | ASP610 |
A | TYR611 |
A | SER612 |
A | GLN613 |
A | ILE614 |
A | GLU615 |
A | HIS639 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG A 902 |
Chain | Residue |
A | ASP610 |
A | TYR611 |
A | ASP785 |
A | 0R5901 |
A | MG903 |
site_id | AC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG A 903 |
Chain | Residue |
A | ASP610 |
A | ASP785 |
A | 0R5901 |
A | MG902 |
A | HOH1001 |
A | HOH1002 |
B | DOC112 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 904 |
Chain | Residue |
A | ARG660 |
A | LYS663 |
A | LYS831 |
A | HOH1067 |
A | HOH1115 |
B | DOC112 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ACT A 905 |
Chain | Residue |
A | ASP452 |
A | TYR455 |
A | ARG596 |
A | ARG596 |
A | ASP826 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 906 |
Chain | Residue |
A | GLY672 |
A | GLU745 |
A | ARG746 |
C | DA203 |
site_id | AC7 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL A 907 |
Chain | Residue |
A | THR544 |
A | TYR545 |
A | PRO579 |
A | ASN580 |
A | ASN583 |
A | GOL910 |
A | HOH1136 |
C | DC209 |
C | DC210 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT A 908 |
Chain | Residue |
A | ARG313 |
A | TRP318 |
A | ASP551 |
site_id | AC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL A 909 |
Chain | Residue |
A | LYS354 |
A | ASP355 |
A | ARG563 |
A | GLN566 |
A | HOH1009 |
A | HOH1073 |
A | HOH1128 |
site_id | BC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL A 910 |
Chain | Residue |
A | LEU552 |
A | ASP578 |
A | PRO579 |
A | GOL907 |
A | HOH1018 |
C | DC209 |
C | DC210 |
site_id | BC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL A 911 |
Chain | Residue |
A | LYS508 |
A | THR509 |
A | ARG715 |
A | LEU733 |
A | GLU734 |
A | ARG736 |
A | HOH1134 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACT A 912 |
Chain | Residue |
A | SER460 |
A | LYS542 |
site_id | BC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 913 |
Chain | Residue |
A | ARG728 |
A | TYR729 |
A | HOH1013 |
A | HOH1173 |
site_id | BC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO A 914 |
Chain | Residue |
A | GLU347 |
A | ARG349 |
A | GLY370 |
A | ASP371 |
site_id | BC6 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL B 201 |
Chain | Residue |
B | HOH313 |
B | HOH315 |
B | HOH323 |
C | DG208 |
C | DC209 |
C | HOH416 |
B | DG107 |
B | DG108 |
site_id | BC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL C 301 |
Chain | Residue |
A | ARG728 |
A | HOH1173 |
C | DG206 |
C | DC207 |
site_id | BC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG C 302 |
Chain | Residue |
C | HOH432 |
C | HOH433 |
C | HOH434 |
C | HOH435 |
Functional Information from PROSITE/UniProt
site_id | PS00447 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL |
Chain | Residue | Details |
A | ARG659-LEU678 | |