4E0U
Crystal structure of CdpNPT in complex with thiolodiphosphate and (S)-benzodiazependione
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Cyclic dipeptide N-prenyltransferase | polymer | 428 | 48760.6 | 2 | UniProt (D1D8L6) Pfam (PF11991) | Aspergillus fumigatus | |
| 2 | C, I (A, B) | (3S)-3-(1H-indol-3-ylmethyl)-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione | non-polymer | 305.3 | 2 | Chemie (0MV) | |||
| 3 | D, J (A, B) | TRIHYDROGEN THIODIPHOSPHATE | non-polymer | 193.0 | 2 | Chemie (PIS) | |||
| 4 | E, L (A, B) | IMIDAZOLE | non-polymer | 69.1 | 2 | Chemie (IMD) | |||
| 5 | F, H, K, M (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 6 | G (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 7 | N, O (A, B) | water | water | 18.0 | 47 | Chemie (HOH) |
Sequence modifications
A, B: 29 - 440 (UniProt: D1D8L6)
| PDB | External Database | Details |
|---|---|---|
| His 13 | - | expression tag |
| His 14 | - | expression tag |
| His 15 | - | expression tag |
| His 16 | - | expression tag |
| His 17 | - | expression tag |
| His 18 | - | expression tag |
| Ser 19 | - | expression tag |
| Ser 20 | - | expression tag |
| Gly 21 | - | expression tag |
| Leu 22 | - | expression tag |
| Val 23 | - | expression tag |
| Pro 24 | - | expression tag |
| Arg 25 | - | expression tag |
| Gly 26 | - | expression tag |
| Ser 27 | - | expression tag |
| His 28 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 97521.3 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1406.2 | |
| All* | Total formula weight | 98927.4 |
