4E0U
Crystal structure of CdpNPT in complex with thiolodiphosphate and (S)-benzodiazependione
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Cyclic dipeptide N-prenyltransferase | polymer | 428 | 48760.6 | 2 | UniProt (D1D8L6) Pfam (PF11991) In PDB | Aspergillus fumigatus | |
2 | A, B | (3S)-3-(1H-indol-3-ylmethyl)-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione | non-polymer | 305.3 | 2 | Chemie (0MV) | |||
3 | A, B | TRIHYDROGEN THIODIPHOSPHATE | non-polymer | 193.0 | 2 | Chemie (PIS) | |||
4 | A, B | IMIDAZOLE | non-polymer | 69.1 | 2 | Chemie (IMD) | |||
5 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
6 | A | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
7 | water | water | 18.0 | 47 | Chemie (HOH) |
Sequence modifications
A, B: 29 - 440 (UniProt: D1D8L6)
PDB | External Database | Details |
---|---|---|
His 13 | - | expression tag |
His 14 | - | expression tag |
His 15 | - | expression tag |
His 16 | - | expression tag |
His 17 | - | expression tag |
His 18 | - | expression tag |
Ser 19 | - | expression tag |
Ser 20 | - | expression tag |
Gly 21 | - | expression tag |
Leu 22 | - | expression tag |
Val 23 | - | expression tag |
Pro 24 | - | expression tag |
Arg 25 | - | expression tag |
Gly 26 | - | expression tag |
Ser 27 | - | expression tag |
His 28 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 97521.3 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1406.2 | |
All* | Total formula weight | 98927.4 |