4DWR
RNA ligase RtcB/Mn2+ complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (B, A, C) | tRNA-splicing ligase RtcB | polymer | 487 | 54176.1 | 3 | UniProt (O59245) Pfam (PF01139) | Pyrococcus horikoshii | Pho hyp2 intein |
| 2 | D, E, F (D, E, F) | beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose | branched | 342.3 | 3 | In PDB BIRD (PRD_900003) | sucrose | ||
| 3 | G, H, Q, R, Y... (B, A, C) | MANGANESE (II) ION | non-polymer | 54.9 | 6 | Chemie (MN) | |||
| 4 | AA, BA, CA, DA, EA... (C, B, A) | SULFATE ION | non-polymer | 96.1 | 21 | Chemie (SO4) | |||
| 5 | HA, IA, JA (B, A, C) | water | water | 18.0 | 1654 | Chemie (HOH) |
Sequence modifications
B, A, C: 1 - 97 (UniProt: O59245)
B, A, C: 98 - 481 (UniProt: O59245)
B, A, C: 98 - 481 (UniProt: O59245)
| PDB | External Database | Details |
|---|---|---|
| Ala 482 | - | expression tag |
| Ala 483 | - | expression tag |
| Ala 484 | - | expression tag |
| Leu 485 | - | expression tag |
| Glu 486 | - | expression tag |
| His 487 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 162528.2 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 1026.9 | |
| Non-Polymers* | Number of molecules | 27 |
| Total formula weight | 2347.0 | |
| All* | Total formula weight | 165902.1 |
