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4DQQ

Ternary complex of Bacillus DNA Polymerase I Large Fragment E658A, DNA duplex, and rCTP (paired with dG of template) in presence of Mg2+

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, D)
DNA polymerasepolymer59267416.32UniProt (Q5KWC1)
Pfam (PF22619)
Pfam (PF00476)
Geobacillus kaustophilus
2C, E
(B, E)
DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DOC))-3')polymer92635.82
3D, F
(C, F)
DNA (5'-D(*CP*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3')polymer134056.62
4G, L
(A, D)
CYTIDINE-5'-TRIPHOSPHATEnon-polymer483.22Chemie (CTP)
5H, N
(A, D)
SULFATE IONnon-polymer96.12Chemie (SO4)
6I, J, O, P
(A, D)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.24Chemie (MPD)
7K
(A)
2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.21Chemie (MES)
8M
(D)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
9Q, R, S, T, U...
(A, D, B, C, E...)
waterwater18.01233Chemie (HOH)
Sequence modifications
A, D: 285 - 876 (UniProt: Q5KWC1)
PDBExternal DatabaseDetails
Ala 598Asp 600engineered mutation
Ala 658Glu 660engineered mutation
His 823Arg 825SEE REMARK 999
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight148217.3
Non-Polymers*Number of molecules10
Total formula weight1850.7
All*Total formula weight150068.0
*Water molecules are not included.

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PDB entries from 2025-07-02

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