Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006139 | biological_process | nucleobase-containing compound metabolic process |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0008408 | molecular_function | 3'-5' exonuclease activity |
D | 0003676 | molecular_function | nucleic acid binding |
D | 0003677 | molecular_function | DNA binding |
D | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
D | 0006139 | biological_process | nucleobase-containing compound metabolic process |
D | 0006260 | biological_process | DNA replication |
D | 0006261 | biological_process | DNA-templated DNA replication |
D | 0008408 | molecular_function | 3'-5' exonuclease activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE CTP A 901 |
Chain | Residue |
A | GLU469 |
A | GLN470 |
A | ASP471 |
A | ARG472 |
A | LEU473 |
A | LEU767 |
A | HIS768 |
A | HOH1451 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 A 902 |
Chain | Residue |
A | ASN780 |
A | HOH1132 |
A | HOH1179 |
A | HOH1318 |
D | ARG423 |
D | PRO424 |
A | ARG779 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MPD A 903 |
Chain | Residue |
A | HOH1027 |
A | HOH1287 |
D | LEU352 |
D | LYS383 |
D | HOH1037 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MPD A 904 |
Chain | Residue |
A | GLU321 |
A | VAL322 |
A | VAL323 |
A | ASP425 |
A | ARG435 |
A | HOH1291 |
site_id | AC5 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE MES A 905 |
Chain | Residue |
A | ARG615 |
A | ALA658 |
A | PHE710 |
A | VAL713 |
A | TYR714 |
A | ASN793 |
A | ILE796 |
A | GLN797 |
A | HOH1398 |
B | DOC29 |
C | DG4 |
site_id | AC6 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE CTP D 901 |
Chain | Residue |
D | ARG615 |
D | GLN656 |
D | ALA658 |
D | HIS682 |
D | ARG702 |
D | LYS706 |
D | PHE710 |
D | ASP830 |
D | MG902 |
D | HOH1035 |
D | HOH1040 |
D | HOH1050 |
D | HOH1086 |
D | HOH1092 |
D | HOH1154 |
D | HOH1319 |
D | HOH1330 |
D | HOH1356 |
D | HOH1527 |
D | HOH1556 |
D | HOH1595 |
E | DOC29 |
F | DG3 |
F | DG4 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG D 902 |
Chain | Residue |
D | TYR654 |
D | ASP830 |
D | CTP901 |
D | HOH1595 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 D 903 |
Chain | Residue |
D | MET299 |
D | ALA300 |
D | ARG343 |
D | ARG677 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MPD D 904 |
Chain | Residue |
A | LEU352 |
A | LYS383 |
D | HOH1065 |
D | HOH1099 |
site_id | BC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MPD D 905 |
Chain | Residue |
A | GLY504 |
A | LYS505 |
D | ALA353 |
D | ASP354 |
D | HOH1193 |
D | HOH1313 |
D | HOH1543 |
Functional Information from PROSITE/UniProt
site_id | PS00447 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_A DNA polymerase family A signature. RrqAKavnFGivYgiSdygL |
Chain | Residue | Details |
A | ARG702-LEU721 | |