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4DFU

Inhibition of an antibiotic resistance enzyme: crystal structure of aminoglycoside phosphotransferase APH(2")-ID/APH(2")-IVA in complex with kanamycin inhibited with quercetin

Replaces:  3VCQReplaces:  3R82
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
APH(2")-Idpolymer32238279.02UniProt (O68183)
Pfam (PF01636)
Enterococcus casseliflavusAPH(2")-IVA
2C, G
(A, B)
KANAMYCIN Anon-polymer484.52Chemie (KAN)
3D, F, H
(A, B)
3,5,7,3',4'-PENTAHYDROXYFLAVONEnon-polymer302.23Chemie (QUE)
4E, I
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
5J, K
(A, B)
waterwater18.0168Chemie (HOH)
Sequence modifications
A, B: 1 - 301 (UniProt: O68183)
PDBExternal DatabaseDetails
Mse -20-expression tag
Gly -19-expression tag
Ser -18-expression tag
Ser -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
Ser -10-expression tag
Ser -9-expression tag
Gly -8-expression tag
Arg -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Gly 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight76558.1
Non-Polymers*Number of molecules7
Total formula weight1946.6
All*Total formula weight78504.7
*Water molecules are not included.

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PDB entries from 2025-07-30

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