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4DEC

Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+, uridine-diphosphate (UDP) and phosphoglyceric acid (PGA)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
GLUCOSYL-3-PHOSPHOGLYCERATE SYNTHASE (GpgS)polymer34436582.71UniProt (O05309)
Pfam (PF00535)
UniProt (by SIFTS) (P9WMW9)
Mycobacterium tuberculosis
2B
(A)
URIDINE-5'-DIPHOSPHATEnon-polymer404.21Chemie (UDP)
PubChem (1158)
PubChem (6031)
PubChem (25323044)
PubChem (25323048)
PubChem (44298965)
PubChem (53486216)
PubChem (60098857)
PubChem (57448939)
PubChem (3084486)
PubChem (91746160)
PubChem (6101632)
PubChem (92332560)
PubChem (92332561)
PubChem (92332562)
PubChem (92332563)
PubChem (93088131)
PubChem (93630083)
PubChem (6604175)
PubChem (11811538)
PubChem (12049241)
3C
(A)
MANGANESE (II) IONnon-polymer54.91Chemie (MN)
PubChem (27854)
4D
(A)
3-PHOSPHOGLYCERIC ACIDnon-polymer186.11Chemie (3PG)
5E, G
(A)
PHOSPHATE IONnon-polymer95.02Chemie (PO4)
PubChem (1061)
6F
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
PubChem (753)
7H
(A)
waterwater18.0217Chemie (HOH)
Sequence modifications
A: 1 - 324 (UniProt: O05309)
PDBExternal DatabaseDetails
Met -19-expression tag
Gly -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight36582.7
Non-Polymers*Number of molecules6
Total formula weight927.2
All*Total formula weight37509.8
*Water molecules are not included.

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PDB entries from 2026-05-06

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