4DDI
Crystal structure of human OTUB1/UbcH5b~Ub/Ub
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C | Ubiquitin-conjugating enzyme E2 D2, Ubiquitin thioesterase OTUB1 | polymer | 399 | 45782.5 | 3 | UniProt (P62837) UniProt (Q96FW1) Pfam (PF00179) Pfam (PF10275) In PDB | Homo sapiens (human) | Ubiquitin carrier protein D2, Ubiquitin-conjugating enzyme E2(17)KB 2, Ubiquitin-conjugating enzyme E2-17 kDa 2, Ubiquitin-protein ligase D2, Deubiquitinating enzyme OTUB1, OTU domain-containing ubiquitin aldehyde-binding protein 1, Otubain-1, hOTU1, Ubiquitin-specific-processing protease OTUB1 |
| 2 | D, E, F, G, H... | Polyubiquitin-C | polymer | 76 | 8576.8 | 6 | UniProt (P0CG48) Pfam (PF00240) In PDB | Homo sapiens (human) | Ubiquitin |
Sequence modifications
A, B, C: 1 - 147 (UniProt: P62837)
A, B, C: 1025 - 1271 (UniProt: Q96FW1)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | EXPRESSION TAG |
| Ala 0 | - | EXPRESSION TAG |
| Ser 85 | Cys 85 | CONFLICT |
| PDB | External Database | Details |
|---|---|---|
| Gly 148 | - | LINKER |
| Gly 149 | - | LINKER |
| Ser 150 | - | LINKER |
| Ser 1091 | Cys 91 | CONFLICT |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 188808.6 | |
| All* | Total formula weight | 188808.6 |
