4DCB
Y. pestis Plasminogen Activator Pla in Complex with Human Plasminogen Activation Loop Peptide ALP11
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Coagulase/fibrinolysin | polymer | 297 | 33281.3 | 1 | UniProt (P17811) Pfam (PF01278) | Yersinia pestis | Plasminogen activator |
| 2 | B (F) | Plasminogen | polymer | 11 | 1106.4 | 1 | UniProt (P00747) | Homo sapiens | Plasmin heavy chain A, Activation peptide, Angiostatin, Plasmin heavy chain A, short form, Plasmin light chain B |
| 3 | C, D, E, F (A) | (4R)-2-METHYLPENTANE-2,4-DIOL | non-polymer | 118.2 | 4 | Chemie (MRD) | |||
| 4 | G, H (A) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 2 | Chemie (MPD) | |||
| 5 | I (A) | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | non-polymer | 306.4 | 1 | Chemie (C8E) | |||
| 6 | J (A) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 7 | K (A) | water | water | 18.0 | 106 | Chemie (HOH) |
Sequence modifications
A: 5 - 292 (UniProt: P17811)
F: 557 - 566 (UniProt: P00747)
| PDB | External Database | Details |
|---|---|---|
| Asn 84 | Asp 104 | engineered mutation |
| Gly 293 | - | expression tag |
| Gly 294 | - | expression tag |
| Gly 295 | - | expression tag |
| His 296 | - | expression tag |
| His 297 | - | expression tag |
| His 298 | - | expression tag |
| His 299 | - | expression tag |
| His 300 | - | expression tag |
| His 301 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Lys 567 | - | insertion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 34387.7 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1110.5 | |
| All* | Total formula weight | 35498.2 |






