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4DCB

Y. pestis Plasminogen Activator Pla in Complex with Human Plasminogen Activation Loop Peptide ALP11

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Coagulase/fibrinolysinpolymer29733281.31UniProt (P17811)
Pfam (PF01278)
Yersinia pestisPlasminogen activator
2B
(F)
Plasminogenpolymer111106.41UniProt (P00747)Homo sapiensPlasmin heavy chain A, Activation peptide, Angiostatin, Plasmin heavy chain A, short form, Plasmin light chain B
3C, D, E, F
(A)
(4R)-2-METHYLPENTANE-2,4-DIOLnon-polymer118.24Chemie (MRD)
4G, H
(A)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.22Chemie (MPD)
5I
(A)
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANEnon-polymer306.41Chemie (C8E)
6J
(A)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
7K
(A)
waterwater18.0106Chemie (HOH)
Sequence modifications
A: 5 - 292 (UniProt: P17811)
PDBExternal DatabaseDetails
Asn 84Asp 104engineered mutation
Gly 293-expression tag
Gly 294-expression tag
Gly 295-expression tag
His 296-expression tag
His 297-expression tag
His 298-expression tag
His 299-expression tag
His 300-expression tag
His 301-expression tag
F: 557 - 566 (UniProt: P00747)
PDBExternal DatabaseDetails
Lys 567-insertion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight34387.7
Non-Polymers*Number of molecules8
Total formula weight1110.5
All*Total formula weight35498.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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