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4CH5

Structure of pyrrolysyl-tRNA synthetase in complex with adenylated propionyl lysine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1APYRROLYSINE--TRNA LIGASEpolymer29133416.21UniProt (Q8PWY1)
Pfam (PF01409)
In PDB
METHANOSARCINA MAZEIPYRROLYSINE--TRNA(PYL) LIGASE, PYRROLYSYL-TRNA SYNTHETASE, PYLRS
2A(S)-2-amino-6-propionamidohexanoic(((2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyl phosphoric) anhydridenon-polymer531.51Chemie (YLP)
3AMAGNESIUM IONnon-polymer24.31Chemie (MG)
4A1,2-ETHANEDIOLnon-polymer62.15Chemie (EDO)
5APYROPHOSPHATE 2-non-polymer176.01Chemie (POP)
6waterwater18.089Chemie (HOH)
Sequence modifications
A: 185 - 454 (UniProt: Q8PWY1)
PDBExternal DatabaseDetails
Met 164-expression tag
Gly 165-expression tag
Ser 166-expression tag
Ser 167-expression tag
His 168-expression tag
His 169-expression tag
His 170-expression tag
His 171-expression tag
His 172-expression tag
His 173-expression tag
Ser 174-expression tag
Ser 175-expression tag
Gly 176-expression tag
Leu 177-expression tag
Val 178-expression tag
Pro 179-expression tag
Arg 180-expression tag
Gly 181-expression tag
Ser 182-expression tag
His 183-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight33416.2
Non-Polymers*Number of molecules8
Total formula weight1042.1
All*Total formula weight34458.3
*Water molecules are not included.

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PDB entries from 2024-07-17

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