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4CEB

Interrogating HIV integrase for compounds that bind- a SAMPL challenge

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
INTEGRASEpolymer18320044.72UniProt (Q76353)
Pfam (PF00665)
UniProt (by SIFTS) (P12497)
HUMAN IMMUNODEFICIENCY VIRUS 1
2C, D, H, I
(A, B)
SULFATE IONnon-polymer96.14Chemie (SO4)
3E, J
(A, B)
ACETIC ACIDnon-polymer60.12Chemie (ACY)
4F, K
(A, B)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
5G, L
(A, B)
GLYCEROLnon-polymer92.12Chemie (GOL)
6M, N
(B)
(R)-[(2S)-5-carboxy-2-(2-carboxyethyl)-2,3-dihydro-1,4-benzodioxin-6-yl]methyl-[[2-[(4-methoxyphenyl)methylcarbamoyl]phenyl]methyl]-prop-2-enyl-azaniumnon-polymer575.62Chemie (ZSV)
7O, P
(A, B)
waterwater18.0143Chemie (HOH)
Sequence modifications
A, B: 50 - 212 (UniProt: Q76353)
PDBExternal DatabaseDetails
Met 30-expression tag
Gly 31-expression tag
Ser 32-expression tag
Ser 33-expression tag
His 34-expression tag
His 35-expression tag
His 36-expression tag
His 37-expression tag
His 38-expression tag
His 39-expression tag
Ser 40-expression tag
Ser 41-expression tag
Gly 42-expression tag
Leu 43-expression tag
Val 44-expression tag
Pro 45-expression tag
Arg 46-expression tag
Gly 47-expression tag
Ser 48-expression tag
His 49-expression tag
Ser 56Cys 56engineered mutation
Asp 139Phe 139engineered mutation
His 185Phe 185engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight40089.3
Non-Polymers*Number of molecules12
Total formula weight1963.9
All*Total formula weight42053.3
*Water molecules are not included.

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PDB entries from 2025-11-19

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