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4BZC

Crystal structure of the tetrameric dGTP-bound wild type SAMHD1 catalytic core

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1polymer55063408.34UniProt (Q9Y3Z3)
Pfam (PF01966)
HOMO SAPIENS (HUMAN)DNTPASE, DENDRITIC CELL-DERIVED IFNG-INDUCED PROTEIN, DCIP, MONOCYTE PROTEIN 5, MOP-5, SAM DOMAIN AND HD DOMAIN-CONTAINING PROTEIN 1, SAMHD1
2E, G, H, J, L...
(A, B, C, D)
2'-deoxyguanosine-5'-O-(1-thiotriphosphate)non-polymer523.212Chemie (T8T)
3F, K, P, U
(A, B, C, D)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
4I, N, S, X
(A, B, C, D)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
5AA, BA, Y, Z
(C, D, A, B)
waterwater18.034Chemie (HOH)
Sequence modifications
A, B, C, D: 113 - 626 (UniProt: Q9Y3Z3)
PDBExternal DatabaseDetails
Met 77-expression tag
Gly 78-expression tag
Ser 79-expression tag
Ser 80-expression tag
His 81-expression tag
His 82-expression tag
His 83-expression tag
His 84-expression tag
His 85-expression tag
His 86-expression tag
Ser 87-expression tag
Ser 88-expression tag
Gly 89-expression tag
Leu 90-expression tag
Val 91-expression tag
Pro 92-expression tag
Arg 93-expression tag
Gly 94-expression tag
Ser 95-expression tag
His 96-expression tag
Met 97-expression tag
Ala 98-expression tag
Ser 99-expression tag
Met 100-expression tag
Thr 101-expression tag
Gly 102-expression tag
Gly 103-expression tag
Gln 104-expression tag
Gln 105-expression tag
Met 106-expression tag
Gly 107-expression tag
Arg 108-expression tag
Asp 109-expression tag
Pro 110-expression tag
Asn 111-expression tag
Ser 112-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight253633.3
Non-Polymers*Number of molecules20
Total formula weight6595.9
All*Total formula weight260229.2
*Water molecules are not included.

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PDB entries from 2024-11-06

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