4BQU
Japanin from Rhipicephalus appendiculatus bound to cholesterol: Orthorhombic crystal form
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | JAPANIN | polymer | 160 | 18640.1 | 2 | UniProt (M1MR49) In PDB | RHIPICEPHALUS APPENDICULATUS | |
2 | C | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G47477HI) | |||
3 | D, E | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 2 | In PDB GlyTouCan (G86851RC) | |||
4 | A, B | CHOLESTEROL | non-polymer | 386.7 | 2 | Chemie (CLR) | |||
5 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 7 | Chemie (EDO) | |||
6 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
7 | A, B | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
8 | water | water | 18.0 | 77 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 152 (UniProt: M1MR49)
PDB | External Database | Details |
---|---|---|
Gly 153 | - | expression tag |
Gly 154 | - | expression tag |
His 155 | - | expression tag |
His 156 | - | expression tag |
His 157 | - | expression tag |
His 158 | - | expression tag |
His 159 | - | expression tag |
His 160 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 37280.2 | |
Branched | Number of molecules | 3 |
Total formula weight | 1467.4 | |
Non-Polymers* | Number of molecules | 13 |
Total formula weight | 1535.4 | |
All* | Total formula weight | 40282.9 |