4AP4
Rnf4 - ubch5a - ubiquitin heterotrimeric complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | E3 UBIQUITIN LIGASE RNF4 | polymer | 133 | 14758.2 | 1 | UniProt (O88846) Pfam (PF13639) In PDB | RATTUS NORVEGICUS (NORWAY RAT) | RING FINGER PROTEIN 4, SMALL NUCLEAR RING FINGER PROTEIN, PROTEIN SNURF |
2 | B, E | UBIQUITIN-CONJUGATING ENZYME E2 D1 | polymer | 153 | 17134.6 | 2 | UniProt (P51668) Pfam (PF00179) In PDB | HOMO SAPIENS (HUMAN) | UBCH5A, STIMULATOR OF FE TRANSPORT, SFT, UBC4/5 HOMOLOG, UBCH5, UBIQUITIN CARRIER PROTEIN D1, UBIQUITIN-CONJUGATING ENZYME E2(17)KB 1, UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 1, UBIQUITIN-PROTEIN LIGASE D1 |
3 | C, F | UBIQUITIN C | polymer | 80 | 8893.2 | 2 | UniProt (F5H7Y5) Pfam (PF00240) UniProt (by SIFTS) (P0CG48) In PDB | HOMO SAPIENS (HUMAN) | |
4 | A | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
5 | water | water | 18.0 | 137 | Chemie (HOH) |
Sequence modifications
A: 131 - 194 (UniProt: O88846)
A: 196 - 259 (UniProt: O88846)
B, E: 1 - 147 (UniProt: P51668)
C, F: 0 - 76 (UniProt: F5H7Y5)
PDB | External Database | Details |
---|---|---|
Gly 127 | - | expression tag |
Ala 128 | - | expression tag |
Met 129 | - | expression tag |
Gly 130 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly 195 | - | linker |
PDB | External Database | Details |
---|---|---|
Gly -5 | - | expression tag |
Ala -4 | - | expression tag |
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Arg 22 | Ser 22 | engineered mutation |
Lys 85 | Cys 85 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ala -2 | - | expression tag |
Met -1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 66813.7 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 261.6 | |
All* | Total formula weight | 67075.3 |