3ZE6
3D structure of the Ni-Fe-Se hydrogenase from D. vulgaris Hildenborough in the as-isolated oxidized state at 1.50 Angstroms
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | PERIPLASMIC [NIFESE] HYDROGENASE, SMALL SUBUNIT | polymer | 283 | 30293.6 | 1 | UniProt (Q72AS4) Pfam (PF01058) Pfam (PF14720) In PDB | DESULFOVIBRIO VULGARIS | |
| 2 | B | PERIPLASMIC [NIFESE] HYDROGENASE, LARGE SUBUNIT, SELENOCYS SELENOCYSTEINE-CONTAINING | polymer | 484 | 53431.1 | 1 | UniProt (Q72AS3) Pfam (PF00374) In PDB | DESULFOVIBRIO VULGARIS | |
| 3 | A | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 3 | Chemie (SF4) | |||
| 4 | A | BIS-(MU-2-OXO),[(MU-3--SULFIDO)-BIS(MU-2--SULFIDO)-TRIS(CYS-S)-TRI-IRON] (AQUA)(GLU-O)IRON(II) | non-polymer | 367.6 | 1 | Chemie (FSX) | |||
| 5 | A, B | 3-[DODECYL(DIMETHYL)AMMONIO]PROPANE-1-SULFONATE | non-polymer | 335.5 | 5 | Chemie (SBY) | |||
| 6 | B | CARBONMONOXIDE-(DICYANO) IRON | non-polymer | 135.9 | 1 | Chemie (FCO) | |||
| 7 | B | NICKEL (II) ION | non-polymer | 58.7 | 1 | Chemie (NI) | |||
| 8 | B | FE (II) ION | non-polymer | 55.8 | 1 | Chemie (FE2) | |||
| 9 | B | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 10 | B | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 11 | water | water | 18.0 | 700 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 83724.8 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 3478.2 | |
| All* | Total formula weight | 87203.0 |
