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3ZDB

Structure of E. coli ExoIX in complex with the palindromic 5ov4 DNA oligonucleotide, di-magnesium and potassium

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
PROTEIN XNIpolymer25128203.21UniProt (Q8X6R9)
Pfam (PF02739)
Pfam (PF01367)
ESCHERICHIA COLIEXOIX
2B
(X)
5OV4 DNA, 5'-D(*AP*AP*AP*AP*GP*CP*GP*TP*AP*CP*GP*CP)-3'polymer123680.41SYNTHETIC CONSTRUCT
3C
(A)
POTASSIUM IONnon-polymer39.11Chemie (K)
4D, E, G
(A)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
5F
(A)
ACETATE IONnon-polymer59.01Chemie (ACT)
6H, I
(A, X)
waterwater18.0203Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight31883.6
Non-Polymers*Number of molecules5
Total formula weight171.1
All*Total formula weight32054.6
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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