3WS6
Crystal Structure of H-2D in complex with a mimotopic peptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, B) | H-2 class I histocompatibility antigen, D-B alpha chain | polymer | 275 | 32030.6 | 2 | UniProt (P01899) Pfam (PF00129) Pfam (PF07654) | Mus musculus (mouse) | H-2D(B) |
| 2 | B, D (D, C) | Beta-2-microglobulin | polymer | 100 | 11835.6 | 2 | UniProt (P01887) Pfam (PF07654) | Mus musculus (mouse) | |
| 3 | E, F (E, F) | Mimotope 9-mer peptide | polymer | 9 | 1127.2 | 2 | |||
| 4 | G, K, N, T (A, D, B, C) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 5 | H, I, M, O, P... (A, D, B, C) | IMIDAZOLE | non-polymer | 69.1 | 6 | Chemie (IMD) | |||
| 6 | J, Q, R, S (A, B) | GLYCEROL | non-polymer | 92.1 | 4 | Chemie (GOL) | |||
| 7 | L, U, V (D, C) | SULFATE ION | non-polymer | 96.1 | 3 | Chemie (SO4) | |||
| 8 | AA, BA, CA, X, Y... (C, E, F, A, D...) | water | water | 18.0 | 640 | Chemie (HOH) |
Sequence modifications
D, C: 21 - 119 (UniProt: P01887)
| PDB | External Database | Details |
|---|---|---|
| Met 20 | - | expression tag |
| Asp 105 | Ala 105 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 89986.9 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 1332.7 | |
| All* | Total formula weight | 91319.6 |
