3WEX
Crystal structure of HLA-DP5 in complex with Cry j 1-derived peptide (residues 214-222)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G | MHC class II antigen | polymer | 193 | 22230.7 | 4 | UniProt (I2G9G1) Pfam (PF00993) Pfam (PF07654) In PDB | Homo sapiens (human) | HLA-DP5 alpha chain |
| 2 | B, D, F, H | MHC class II antigen | polymer | 221 | 25254.1 | 4 | UniProt (I2FL84) Pfam (PF00969) Pfam (PF07654) In PDB | Homo sapiens (human) | HLA-DP5 beta chain |
| 3 | A, C, E, G | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
| 4 | water | water | 18.0 | 267 | Chemie (HOH) |
Sequence modifications
A, C, E, G: 1 - 181 (UniProt: I2G9G1)
B, D, F, H: 6 - 189 (UniProt: I2FL84)
| PDB | External Database | Details |
|---|---|---|
| Ser 182 | - | expression tag |
| Gly 183 | - | expression tag |
| Pro 184 | - | expression tag |
| Ser 185 | - | expression tag |
| Ser 186 | - | expression tag |
| Gly 187 | - | expression tag |
| Glu 188 | - | expression tag |
| Asn 189 | - | expression tag |
| Leu 190 | - | expression tag |
| Tyr 191 | - | expression tag |
| Phe 192 | - | expression tag |
| Gln 193 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Lys -19 | - | expression tag |
| Val -18 | - | expression tag |
| Thr -17 | - | expression tag |
| Val -16 | - | expression tag |
| Ala -15 | - | expression tag |
| Phe -14 | - | expression tag |
| Asn -13 | - | expression tag |
| Gln -12 | - | expression tag |
| Phe -11 | - | expression tag |
| Gly -10 | - | expression tag |
| Gly -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Leu -7 | - | expression tag |
| Val -6 | - | expression tag |
| Pro -5 | - | expression tag |
| Arg -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Gly 1 | - | expression tag |
| Gly 2 | - | expression tag |
| Ser 3 | - | expression tag |
| Pro 4 | - | expression tag |
| Glu 5 | - | expression tag |
| Ser 190 | - | expression tag |
| Gly 191 | - | expression tag |
| Pro 192 | - | expression tag |
| Ser 193 | - | expression tag |
| Ser 194 | - | expression tag |
| Gly 195 | - | expression tag |
| Glu 196 | - | expression tag |
| Asn 197 | - | expression tag |
| Leu 198 | - | expression tag |
| Tyr 199 | - | expression tag |
| Phe 200 | - | expression tag |
| Gln 201 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 189939.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 884.8 | |
| All* | Total formula weight | 190824.0 |
