3WBF
Crystal Structure of meso-diaminopimelate dehydrogenase from Symbiobacterium thermophilum co-crystallized with NADP+ and DAP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Diaminopimelate dehydrogenase | polymer | 305 | 33312.4 | 3 | UniProt (Q67PI3) Pfam (PF01408) Pfam (PF16654) | Symbiobacterium thermophilum | |
| 2 | D, L, R (A, B, C) | 2,6-DIAMINOPIMELIC ACID | non-polymer | 190.2 | 3 | Chemie (API) | |||
| 3 | E, F, G, H, I... (A, B, C) | GLYCEROL | non-polymer | 92.1 | 16 | Chemie (GOL) | |||
| 4 | K, Q, Y (A, B, C) | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 743.4 | 3 | Chemie (NAP) | |||
| 5 | AA, BA, Z (B, C, A) | water | water | 18.0 | 1406 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 299 (UniProt: Q67PI3)
| PDB | External Database | Details |
|---|---|---|
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 99937.2 | |
| Non-Polymers* | Number of molecules | 22 |
| Total formula weight | 4274.3 | |
| All* | Total formula weight | 104211.5 |
