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3VTH

Crystal structure of full-length HypF in the phosphate- and nucleotide-bound form

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Hydrogenase maturation factorpolymer76186867.82UniProt (Q8RDB0)
Pfam (PF00708)
Pfam (PF07503)
Pfam (PF01300)
Pfam (PF17788)
Pfam (PF22521)
Thermoanaerobacter tengcongensis
2C, D, Q
(A, B)
ZINC IONnon-polymer65.43Chemie (ZN)
3E, J, K, L, M...
(A, B)
PHOSPHATE IONnon-polymer95.07Chemie (PO4)
PubChem (1061)
4F, S
(A, B)
DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTERnon-polymer505.22Chemie (APC)
5G, T
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
PubChem (888)
6H, U
(A, B)
PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTERnon-polymer425.22Chemie (AP2)
PubChem (17753808)
PubChem (4798)
PubChem (46936584)
PubChem (58971924)
PubChem (447198)
PubChem (494348)
PubChem (89332981)
PubChem (92199)
PubChem (91691114)
PubChem (92209895)
PubChem (92209894)
PubChem (92209896)
PubChem (117783790)
PubChem (124671028)
PubChem (12192368)
PubChem (168007098)
7I, V
(A, B)
FE (III) IONnon-polymer55.82Chemie (FE)
PubChem (29936)
8N, O, P
(A, B)
GLYCEROLnon-polymer92.13Chemie (GOL)
PubChem (753)
9X, Y
(A, B)
waterwater18.0507Chemie (HOH)
Sequence modifications
A, B: 1 - 751 (UniProt: Q8RDB0)
PDBExternal DatabaseDetails
Ser 752-expression tag
Ala 753-expression tag
Trp 754-expression tag
Ser 755-expression tag
His 756-expression tag
Pro 757-expression tag
Gln 758-expression tag
Phe 759-expression tag
Glu 760-expression tag
Lys 761-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight173735.6
Non-Polymers*Number of molecules21
Total formula weight3158.5
All*Total formula weight176894.0
*Water molecules are not included.

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PDB entries from 2026-05-13

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