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3VED

Rhodococcus jostii RHA1 DypB D153H variant in complex with heme

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
DypBpolymer35337560.63UniProt (Q0SE24)
Pfam (PF04261)
Pfam (PF20628)
Rhodococcus jostii
2D, H, K
(A, B, C)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.53Chemie (HEM)
3E, G, I, J, L...
(A, B, C)
CHLORIDE IONnon-polymer35.56Chemie (CL)
4F
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
5N, O, P
(A, B, C)
waterwater18.0303Chemie (HOH)
Sequence modifications
A, B, C: 1 - 350 (UniProt: Q0SE24)
PDBExternal DatabaseDetails
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
His 153Asp 153engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight112681.9
Non-Polymers*Number of molecules10
Total formula weight2154.3
All*Total formula weight114836.1
*Water molecules are not included.

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PDB entries from 2025-12-17

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