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3UQU

Crystal structure of BACE1 with its inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Beta-secretase 1polymer43348222.91UniProt (P56817)
Pfam (PF00026)
Homo sapiens (human)BACE1, Aspartyl protease 2, Beta-site amyloid precursor protein cleaving enzyme 1, Beta-site APP cleaving enzyme 1, Membrane-associated aspartic protease 2
2B
(A)
N-[(1R)-1-(4-fluorophenyl)ethyl]-N'-[(2S,3S)-3-hydroxy-1-phenyl-4-(1H-pyrazol-1-yl)butan-2-yl]-5-[methyl(methylsulfonyl)amino]benzene-1,3-dicarboxamidenon-polymer607.71Chemie (ZPX)
3C, D, E
(A)
SULFATE IONnon-polymer96.13Chemie (SO4)
4F, H
(A)
UREAnon-polymer60.12Chemie (URE)
5G
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
6I
(A)
waterwater18.0309Chemie (HOH)
Sequence modifications
A: -18 - 393 (UniProt: P56817)
PDBExternal DatabaseDetails
Met -39-expression tag
Gly -38-expression tag
Ser -37-expression tag
Ser -36-expression tag
His -35-expression tag
His -34-expression tag
His -33-expression tag
His -32-expression tag
His -31-expression tag
His -30-expression tag
Ser -29-expression tag
Ala -28-expression tag
Gly -27-expression tag
Glu -26-expression tag
Asn -25-expression tag
Leu -24-expression tag
Tyr -23-expression tag
Phe -22-expression tag
Gln -21-expression tag
Gly -20-expression tag
Thr -19-expression tag
Ala 75Lys 136engineered mutation
Ala 77Glu 138engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight48222.9
Non-Polymers*Number of molecules7
Total formula weight1051.4
All*Total formula weight49274.4
*Water molecules are not included.

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PDB entries from 2025-12-10

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