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3U8O

Human thrombin complexed with D-Phe-Pro-D-Arg-D-Thr

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(L)
Thrombin light chainpolymer303518.01UniProt (P00734)
Pfam (PF09396)
Homo sapiens (human)ALPHA-THROMBIN, Prothrombin
2B
(H)
Thrombin heavy chainpolymer25929780.21UniProt (P00734)
Pfam (PF00089)
Homo sapiens (human)ALPHA-THROMBIN, Prothrombin
3C
(I)
D-PHE-PRO-D-ARG-D-THR DERIVED DIRECT THROMBIN INHIBITORpolymer5518.61BIRD (PRD_000940)synthetic construct
4D
(H)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.21Chemie (NAG)
5E
(H)
SODIUM IONnon-polymer23.01Chemie (NA)
6F
(H)
IODIDE IONnon-polymer126.91Chemie (IOD)
7G
(H)
CHLORIDE IONnon-polymer35.51Chemie (CL)
8H, I
(H)
(4R)-2-METHYLPENTANE-2,4-DIOLnon-polymer118.22Chemie (MRD)
9J, K, L
(L, H, I)
waterwater18.0444Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight33816.8
Non-Polymers*Number of molecules6
Total formula weight642.9
All*Total formula weight34459.7
*Water molecules are not included.

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PDB entries from 2025-12-24

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