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3TPY

Crystal structure of M-PMV dUTPase with a mixed population of substrate (dUPNPP) and post-inversion product (dUMP) in the active sites

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASEpolymer15216155.41UniProt (O92810)
UniProt (by SIFTS) (P07570)
Mason-Pfizer monkey virus (MPMV)
2B
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
PubChem (888)
3C
(A)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
PubChem (3777159)
4D
(A)
2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATEnon-polymer467.21Chemie (DUP)
5E
(A)
2'-DEOXYURIDINE 5'-MONOPHOSPHATEnon-polymer308.21Chemie (UMP)
PubChem (688)
PubChem (65063)
PubChem (57164254)
PubChem (446899)
PubChem (446900)
PubChem (71773959)
PubChem (92144438)
PubChem (92209480)
PubChem (92209481)
PubChem (92209482)
PubChem (92449733)
PubChem (133126534)
6F
(A)
waterwater18.0131Chemie (HOH)
Sequence modifications
A: 1 - 152 (UniProt: O92810)
PDBExternal DatabaseDetails
Lys 1Asn 608engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight16155.4
Non-Polymers*Number of molecules4
Total formula weight921.8
All*Total formula weight17077.2
*Water molecules are not included.

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PDB entries from 2026-05-13

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