3TMQ
Crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from Burkholderia pseudomallei in complex with D-arabinose-5-phosphate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | 2-dehydro-3-deoxyphosphooctonate aldolase 2 | polymer | 285 | 30485.2 | 4 | UniProt (Q3JP68) Pfam (PF00793) | Burkholderia pseudomallei | 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase 2, KDO-8-phosphate synthase 2, Phospho-2-dehydro-3-deoxyoctonate aldolase 2 |
| 2 | E, N (A, C) | ARABINOSE-5-PHOSPHATE | non-polymer | 232.1 | 2 | Chemie (A5P) | |||
| 3 | F, G, H, J, K... (A, B, C, D) | NITRATE ION | non-polymer | 62.0 | 10 | Chemie (NO3) | |||
| 4 | I, L, M, S, U (A, B, C, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 5 | V, W, X, Y (A, B, C, D) | water | water | 18.0 | 629 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 281 (UniProt: Q3JP68)
| PDB | External Database | Details |
|---|---|---|
| Gly -3 | - | expression tag |
| Pro -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 121940.7 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 1394.6 | |
| All* | Total formula weight | 123335.4 |
