3TBV
CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH THE LCMV-DERIVED GP33 ALTERED PEPTIDE ligand (A2G,V3P,Y4A)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (A, C, E, G) | H-2 class I histocompatibility antigen, D-B alpha chain | polymer | 276 | 32087.7 | 4 | UniProt (P01899) Pfam (PF00129) Pfam (PF07654) | Mus musculus (mouse) | H-2D(B) |
| 2 | B, D, F, H (B, D, F, H) | Beta-2-microglobulin | polymer | 99 | 11704.4 | 4 | UniProt (P01887) Pfam (PF07654) | Mus musculus (mouse) | |
| 3 | I, J, K, L (I, J, K, L) | Glycoprotein G1 | polymer | 9 | 937.1 | 4 | UniProt (P07399) | Lymphocytic choriomeningitis virus | |
| 4 | M, Q, R, U (A, C, E, F) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 5 | N, O, P, S, T... (A, B, E, H) | GLYCEROL | non-polymer | 92.1 | 7 | Chemie (GOL) | |||
| 6 | AA, BA, CA, DA, EA... (D, E, F, G, H...) | water | water | 18.0 | 890 | Chemie (HOH) |
Sequence modifications
I, J, K, L: 1 - 9 (UniProt: P07399)
| PDB | External Database | Details |
|---|---|---|
| Gly 2 | Ala 34 | engineered mutation |
| Pro 3 | Val 35 | engineered mutation |
| Ala 4 | Tyr 36 | engineered mutation |
| Met 9 | Cys 41 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 178916.6 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1028.9 | |
| All* | Total formula weight | 179945.5 |
