3SZQ
Structure of an S. pombe APTX/DNA/AMP/Zn complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Aprataxin-like protein | polymer | 206 | 23897.4 | 1 | UniProt (O74859) Pfam (PF01230) Pfam (PF16278) | Schizosaccharomyces pombe (Fission yeast) | Hit family protein 3 |
| 2 | B (B) | 5'-D(*CP*CP*CP*TP*G)-3' | polymer | 5 | 1456.0 | 1 | |||
| 3 | C (C) | 5'-D(*TP*AP*TP*CP*GP*GP*AP*AP*TP*CP*AP*GP*GP*G)-3' | polymer | 14 | 4344.8 | 1 | |||
| 4 | D (A) | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 1 | Chemie (AMP) PubChem (16397049) PubChem (16760266) PubChem (224) PubChem (40467049) PubChem (40469468) PubChem (34768) PubChem (44348067) PubChem (83862) PubChem (45358029) PubChem (46874558) PubChem (40459109) PubChem (57358045) PubChem (57879893) PubChem (57879902) PubChem (46875232) PubChem (446048) PubChem (515384) PubChem (638042) PubChem (177678969) PubChem (6083) PubChem (1549371) PubChem (5316444) PubChem (92144436) PubChem (5742864) PubChem (122197642) PubChem (12358354) PubChem (12163610) PubChem (12358355) PubChem (162290139) PubChem (162946266) PubChem (171699505) | |||
| 5 | E, F (A) | BETA-MERCAPTOETHANOL | non-polymer | 78.1 | 2 | Chemie (BME) | |||
| 6 | G (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 7 | H, I, J (A, B, C) | water | water | 18.0 | 211 | Chemie (HOH) |
Sequence modifications
A: 31 - 232 (UniProt: O74859)
| PDB | External Database | Details |
|---|---|---|
| Gly 27 | - | expression tag |
| Ser 28 | - | expression tag |
| His 29 | - | expression tag |
| Met 30 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 29698.3 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 568.9 | |
| All* | Total formula weight | 30267.2 |
