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3SPY

RB69 DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ADNA polymerasepolymer901104186.61UniProt (Q38087)
Pfam (PF03104)
Pfam (PF00136)
In PDB
Enterobacteria phage RB69Gp43
2T5'-D(*TP*CP*GP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'polymer185541.61
3P5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3'polymer133967.61
4A2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]uridinenon-polymer466.21Chemie (UPC)
5AMAGNESIUM IONnon-polymer24.35Chemie (MG)
6waterwater18.0494Chemie (HOH)
Sequence modifications
A: 1 - 901 (UniProt: Q38087)
PDBExternal DatabaseDetails
Ala 222Asp 222engineered mutation
Ala 327Asp 327engineered mutation
Ala 415Leu 415engineered mutation
Ala 561Leu 561engineered mutation
Gly 565Ser 565engineered mutation
Ala 567Tyr 567engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight113695.8
Non-Polymers*Number of molecules6
Total formula weight587.7
All*Total formula weight114283.5
*Water molecules are not included.

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PDB entries from 2024-08-28

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