3SLD
Structural characterization of a GII.4 2004 norovirus variant (TCH05) bound to A trisaccharide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Capsid | polymer | 311 | 34331.1 | 10 | UniProt (Q5EGK8) Pfam (PF08435) | Norovirus Hu/GII.4/2004/NL | |
| 2 | K, L, M, N, O... (K, L, M, N, O...) | alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose | branched | 529.5 | 8 | In PDB GlyTouCan (G00066MO) | |||
| 3 | AA, BA, S, T, U... (I, J, A, B, C...) | water | water | 18.0 | 707 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J: 221 - 531 (UniProt: Q5EGK8)
| PDB | External Database | Details |
|---|---|---|
| Thr 228 | Ser 228 | SEE REMARK 999 |
| Ala 271 | Val 271 | SEE REMARK 999 |
| Asp 282 | Asn 282 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 343311.2 | |
| Branched | Number of molecules | 8 |
| Total formula weight | 4235.9 | |
| All* | Total formula weight | 347547.1 |
