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3SL4

Crystal structure of the catalytic domain of PDE4D2 with compound 10D

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
cAMP-specific 3',5'-cyclic phosphodiesterase 4Dpolymer36141523.94UniProt (Q08499)
Pfam (PF00233)
Homo sapiens (human)DPDE3, PDE43
2BA, CA, E, F, KB...
(B, A, D, C)
ZINC IONnon-polymer65.48Chemie (ZN)
3AA, AC, BB, CB, CC...
(A, D, C, B)
1,2-ETHANEDIOLnon-polymer62.151Chemie (EDO)
4AB, FA, FC, I, QB...
(C, B, D, A)
DIMETHYL SULFOXIDEnon-polymer78.18Chemie (DMS)
5BC, JB, N, UB, YB
(D, A)
DI(HYDROXYETHYL)ETHERnon-polymer106.15Chemie (PEG)
6GB, GC, QA, V
(C, D, B, A)
PHOSPHATE IONnon-polymer95.04Chemie (PO4)
7HB, HC, RA, X
(C, D, B, A)
ethenyl 6-(ethenylcarbamoyl)-2-[(phenylacetyl)amino]-4,5,6,7-tetrahydrothieno[2,3-c]pyridine-3-carboxylatenon-polymer411.54Chemie (JN4)
8EA, YA
(B, C)
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.32Chemie (EPE)
9IC, JC, KC, LC
(A, B, C, D)
waterwater18.0467Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight166095.5
Non-Polymers*Number of molecules82
Total formula weight7346.8
All*Total formula weight173442.3
*Water molecules are not included.

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PDB entries from 2025-10-08

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