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3SFV

Crystal structure of the GDP-bound Rab1a S25N mutant in complex with the coiled-coil domain of LidA from Legionella pneumophila

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Ras-related protein Rab-1Apolymer18120466.21UniProt (P62820)
Pfam (PF00071)
Homo sapiens (human)YPT1-related protein
2B
(B)
LidA protein, substrate of the Dot/Icm systempolymer34440201.61UniProt (A5IFX1)Legionella pneumophila
3C
(A)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
4D, E
(A, B)
waterwater18.0389Chemie (HOH)
Sequence modifications
A: 1 - 176 (UniProt: P62820)
PDBExternal DatabaseDetails
Gly -4-expression tag
Pro -3-expression tag
Leu -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Asn 25Ser 25engineered mutation
B: 224 - 559 (UniProt: A5IFX1)
PDBExternal DatabaseDetails
Leu 560-expression tag
Glu 561-expression tag
His 562-expression tag
His 563-expression tag
His 564-expression tag
His 565-expression tag
His 566-expression tag
His 567-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight60667.8
Non-Polymers*Number of molecules1
Total formula weight443.2
All*Total formula weight61111.0
*Water molecules are not included.

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PDB entries from 2025-07-23

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