3SFV
Crystal structure of the GDP-bound Rab1a S25N mutant in complex with the coiled-coil domain of LidA from Legionella pneumophila
Functional Information from GO Data
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 24 |
| Details | BINDING SITE FOR RESIDUE GDP A 200 |
| Chain | Residue |
| A | SER20 |
| A | GLU38 |
| A | TYR40 |
| A | ASN124 |
| A | LYS125 |
| A | ASP127 |
| A | LEU128 |
| A | SER154 |
| A | ALA155 |
| A | LYS156 |
| A | HOH209 |
| A | GLY21 |
| A | HOH213 |
| A | HOH229 |
| A | HOH239 |
| A | HOH243 |
| A | HOH255 |
| A | VAL22 |
| A | GLY23 |
| A | LYS24 |
| A | ASN25 |
| A | CYS26 |
| A | TYR36 |
| A | THR37 |
Functional Information from PROSITE/UniProt
| site_id | PS00675 |
| Number of Residues | 14 |
| Details | SIGMA54_INTERACT_1 Sigma-54 interaction domain ATP-binding region A signature. LLLiGDSGVGKncL |
| Chain | Residue | Details |
| A | LEU14-LEU27 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 3 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:22416225, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23588383, ECO:0000269|PubMed:23821544, ECO:0007744|PDB:2FOL, ECO:0007744|PDB:3SFV, ECO:0007744|PDB:3TKL, ECO:0007744|PDB:4FMB, ECO:0007744|PDB:4FMC, ECO:0007744|PDB:4FMD, ECO:0007744|PDB:4FME, ECO:0007744|PDB:4IRU, ECO:0007744|PDB:4JVS |
| Chain | Residue | Details |
| A | GLY18 | |
| A | ASN124 | |
| A | SER154 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:22416225, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23588383, ECO:0000269|PubMed:23821544, ECO:0007744|PDB:2FOL, ECO:0007744|PDB:3SFV, ECO:0007744|PDB:3TKL, ECO:0007744|PDB:4FMC, ECO:0007744|PDB:4FME, ECO:0007744|PDB:4IRU, ECO:0007744|PDB:4JVS |
| Chain | Residue | Details |
| A | TYR36 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:22416225, ECO:0007744|PDB:3TKL |
| Chain | Residue | Details |
| A | ASP66 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | MOD_RES: N-acetylserine => ECO:0000269|Ref.9, ECO:0007744|PubMed:22223895 |
| Chain | Residue | Details |
| A | SER2 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | MOD_RES: (Microbial infection) O-(2-cholinephosphoryl)serine => ECO:0000269|PubMed:21822290, ECO:0000269|PubMed:22158903 |
| Chain | Residue | Details |
| A | SER79 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | CARBOHYD: (Microbial infection) N-beta-linked (GlcNAc) arginine => ECO:0000269|PubMed:32504010 |
| Chain | Residue | Details |
| A | ARG72 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 3 |
| Details | CARBOHYD: (Microbial infection) N-beta-linked (GlcNAc) arginine => ECO:0000269|PubMed:32504010, ECO:0000269|PubMed:32974215 |
| Chain | Residue | Details |
| A | ARG74 | |
| A | ARG82 | |
| A | ARG111 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 3 |
| Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P51153 |
| Chain | Residue | Details |
| A | LYS49 | |
| A | LYS61 |
