3S9C
Russell's viper venom serine proteinase, RVV-V in complex with the fragment (residues 1533-1546) of human factor V
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Vipera russelli proteinase RVV-V gamma | polymer | 234 | 25961.0 | 1 | UniProt (P18965) Pfam (PF00089) | Daboia russellii siamensis (Siamese Russell's viper) | Factor V-activating proteinase gamma, Snake venom factor V activator gamma |
| 2 | B (B) | Coagulation factor V | polymer | 14 | 1665.8 | 1 | UniProt (P12259) | Homo sapiens | Activated protein C cofactor, Proaccelerin, labile factor |
| 3 | C (C) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 4 | D (A) | beta-D-glucopyranose | non-polymer | 180.2 | 1 | Chemie (BGC) | |||
| 5 | E (A) | alpha-D-glucopyranose | non-polymer | 180.2 | 1 | Chemie (GLC) | |||
| 6 | F, G, H, I (A) | ACETATE ION | non-polymer | 59.0 | 4 | Chemie (ACT) | |||
| 7 | J, K, L (A) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
| 8 | M, N (A, B) | water | water | 18.0 | 196 | Chemie (HOH) |
Sequence modifications
A: 16 - 245 (UniProt: P18965)
| PDB | External Database | Details |
|---|---|---|
| - | Glu 132 | deletion |
| - | Asp 133 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 27626.8 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 586.5 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 792.7 | |
| All* | Total formula weight | 29006.0 |
