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3S7K

Structure of thrombin mutant Y225P in the E form

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Prothrombinpolymer353995.42UniProt (P00734)
Pfam (PF09396)
Homo sapiens (human)Coagulation factor II, Activation peptide fragment 1, Activation peptide fragment 2, Thrombin light chain, Thrombin heavy chain
2B, D
(B, D)
Prothrombinpolymer25929714.22UniProt (P00734)
Pfam (PF00089)
Homo sapiens (human)Coagulation factor II, Activation peptide fragment 1, Activation peptide fragment 2, Thrombin light chain, Thrombin heavy chain
3E, G
(A, C)
POTASSIUM IONnon-polymer39.12Chemie (K)
4F, H
(B, D)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.12Chemie (TRS)
5I, J, K, L
(A, B, C, D)
waterwater18.0384Chemie (HOH)
Sequence modifications
B, D: 16 - 247 (UniProt: P00734)
PDBExternal DatabaseDetails
Pro 225Tyr 600engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight67419.2
Non-Polymers*Number of molecules4
Total formula weight322.5
All*Total formula weight67741.7
*Water molecules are not included.

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PDB entries from 2025-12-24

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