3RF7
Crystal structure of an Iron-containing alcohol dehydrogenase (Sden_2133) from Shewanella denitrificans OS-217 at 2.12 A resolution
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Iron-containing alcohol dehydrogenase | polymer | 375 | 42629.9 | 1 | UniProt (Q12MB1) Pfam (PF00465) In PDB | Shewanella denitrificans | |
2 | A | UNKNOWN LIGAND | non-polymer | 1 | Chemie (UNL) | ||||
3 | A | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 1 | Chemie (NAD) | |||
4 | A | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 1 | Chemie (EPE) | |||
5 | A | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) | |||
6 | A | NICKEL (II) ION | non-polymer | 58.7 | 1 | Chemie (NI) | |||
7 | A | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
8 | A | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
9 | A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 2 | Chemie (PEG) | |||
10 | water | water | 18.0 | 357 | Chemie (HOH) |
Sequence modifications
A: 1 - 356 (UniProt: Q12MB1)
PDB | External Database | Details |
---|---|---|
Mse -18 | - | EXPRESSION TAG |
Gly -17 | - | EXPRESSION TAG |
Ser -16 | - | EXPRESSION TAG |
Asp -15 | - | EXPRESSION TAG |
Lys -14 | - | EXPRESSION TAG |
Ile -13 | - | EXPRESSION TAG |
His -12 | - | EXPRESSION TAG |
His -11 | - | EXPRESSION TAG |
His -10 | - | EXPRESSION TAG |
His -9 | - | EXPRESSION TAG |
His -8 | - | EXPRESSION TAG |
His -7 | - | EXPRESSION TAG |
Glu -6 | - | EXPRESSION TAG |
Asn -5 | - | EXPRESSION TAG |
Leu -4 | - | EXPRESSION TAG |
Tyr -3 | - | EXPRESSION TAG |
Phe -2 | - | EXPRESSION TAG |
Gln -1 | - | EXPRESSION TAG |
Gly 0 | - | EXPRESSION TAG |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 42629.9 | |
Non-Polymers* | Number of molecules | 13 |
Total formula weight | 1450.5 | |
All* | Total formula weight | 44080.4 |