3RF7
Crystal structure of an Iron-containing alcohol dehydrogenase (Sden_2133) from Shewanella denitrificans OS-217 at 2.12 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-06 |
Detector | MARMOSAIC 325 mm CCD |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 121.074, 121.074, 275.666 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.947 - 2.120 |
R-factor | 0.1826 |
Rwork | 0.182 |
R-free | 0.19680 |
Structure solution method | SAD |
RMSD bond length | 0.014 |
RMSD bond angle | 1.411 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.15) |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0110) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.947 | 29.947 | 2.180 |
High resolution limit [Å] | 2.120 | 9.480 | 2.120 |
Rmerge | 0.066 | 1.388 | |
Total number of observations | 4693 | 31495 | |
Number of reflections | 58332 | ||
<I/σ(I)> | 8.1 | 20.7 | 1.6 |
Completeness [%] | 100.0 | 97 | 100 |
Redundancy | 7.4 | 6.4 | 7.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.9 | 277 | 0.300M calcium chloride, 26.00% polyethylene glycol 400, 0.1M HEPES pH 7.9, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |