Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3RF7

Crystal structure of an Iron-containing alcohol dehydrogenase (Sden_2133) from Shewanella denitrificans OS-217 at 2.12 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyCCD
Collection date2009-11-06
DetectorMARMOSAIC 325 mm CCD
Spacegroup nameI 41 2 2
Unit cell lengths121.074, 121.074, 275.666
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.947 - 2.120
R-factor0.1826
Rwork0.182
R-free0.19680
Structure solution methodSAD
RMSD bond length0.014
RMSD bond angle1.411
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.15)
Phasing softwareSHELX
Refinement softwareREFMAC (5.5.0110)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.94729.9472.180
High resolution limit [Å]2.1209.4802.120
Rmerge0.0661.388
Total number of observations469331495
Number of reflections58332
<I/σ(I)>8.120.71.6
Completeness [%]100.097100
Redundancy7.46.47.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.92770.300M calcium chloride, 26.00% polyethylene glycol 400, 0.1M HEPES pH 7.9, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon