3QQC
Crystal structure of archaeal Spt4/5 bound to the RNAP clamp domain
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA-directed RNA polymerase subunit b, DNA-directed RNA polymerase subunit a', DNA-directed RNA polymerase subunit A'' | polymer | 436 | 49409.9 | 1 | UniProt (Q8U0M3) UniProt (Q8U0M4) UniProt (Q8U0M5) Pfam (PF04560) Pfam (PF04997) | Pyrococcus furiosus | |
| 2 | B (D) | Transcription antitermination protein nusG | polymer | 163 | 18101.0 | 1 | UniProt (Q8TZK1) Pfam (PF03439) Pfam (PF00467) | Pyrococcus furiosus | |
| 3 | C (E) | DNA-directed RNA polymerase, subunit e'' | polymer | 61 | 6965.0 | 1 | UniProt (Q8U440) Pfam (PF06093) | Pyrococcus furiosus | |
| 4 | D, E, F, G (A, E) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) |
Sequence modifications
A: 2 - 64 (UniProt: Q8U0M3)
A: 67 - 390 (UniProt: Q8U0M4)
A: 400 - 437 (UniProt: Q8U0M5)
D: 1 - 152 (UniProt: Q8TZK1)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Gly 65 | - | linker |
| Gly 66 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Gly 391 | - | linker |
| Ala 392 | - | linker |
| Gly 393 | - | linker |
| Ser 394 | - | linker |
| Gly 395 | - | linker |
| Ala 396 | - | linker |
| Gly 397 | - | linker |
| Ser 398 | - | linker |
| Gly 399 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Lys 438 | - | expression tag |
| His 439 | - | expression tag |
| His 440 | - | expression tag |
| His 441 | - | expression tag |
| His 442 | - | expression tag |
| His 443 | - | expression tag |
| His 444 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ala 153 | - | expression tag |
| Ala 154 | - | expression tag |
| Ala 155 | - | expression tag |
| Leu 156 | - | expression tag |
| Glu 157 | - | expression tag |
| His 158 | - | expression tag |
| His 159 | - | expression tag |
| His 160 | - | expression tag |
| His 161 | - | expression tag |
| His 162 | - | expression tag |
| His 163 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 74475.9 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 261.6 | |
| All* | Total formula weight | 74737.5 |






