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3QLH

HIV-1 Reverse Transcriptase in Complex with Manicol at the RNase H Active Site and TMC278 (Rilpivirine) at the NNRTI Binding Pocket

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
reverse transcriptase/ribonuclease Hpolymer55563801.01UniProt (P03366)
Pfam (PF00078)
Pfam (PF06817)
Pfam (PF06815)
Pfam (PF00075)
Human immunodeficiency virus type 1 (HIV-1)p66 RT
2B
(B)
reverse transcriptase/ribonuclease Hpolymer42349531.91UniProt (P03366)
Pfam (PF00078)
Pfam (PF06817)
Pfam (PF06815)
Human immunodeficiency virus type 1 (HIV-1)p51 RT
3C
(A)
(2S)-5,7-dihydroxy-9-methyl-2-(prop-1-en-2-yl)-1,2,3,4-tetrahydro-6H-benzo[7]annulen-6-onenon-polymer246.31Chemie (MNK)Manicol
4D
(A)
4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrilenon-polymer366.41Chemie (T27)
5E, F
(A)
MANGANESE (II) IONnon-polymer54.92Chemie (MN)
6G
(B)
DIMETHYL SULFOXIDEnon-polymer78.11Chemie (DMS)TMC278, Rilpilvirine
7H
(B)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
8I, J
(A, B)
waterwater18.0103Chemie (HOH)
Sequence modifications
A: 1 - 554 (UniProt: P03366)
PDBExternal DatabaseDetails
Val 0-expression tag
Ala 172Lys 771engineered mutation
Ala 173Lys 772engineered mutation
Ser 280Cys 879engineered mutation
B: 6 - 428 (UniProt: P03366)
PDBExternal DatabaseDetails
Ser 280Cys 879engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight113332.9
Non-Polymers*Number of molecules6
Total formula weight862.8
All*Total formula weight114195.7
*Water molecules are not included.

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PDB entries from 2025-06-11

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