3PLA
Crystal structure of a catalytically active substrate-bound box C/D RNP from Sulfolobus solfataricus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, K (A, B, K) | Pre mRNA splicing protein | polymer | 388 | 44168.5 | 3 | UniProt (Q97ZH3) Pfam (PF21572) Pfam (PF01798) | Sulfolobus solfataricus | NOP5 |
| 2 | C, D, L (C, D, L) | 50S ribosomal protein L7Ae | polymer | 130 | 14075.3 | 3 | UniProt (D0KRE2) Pfam (PF01248) | Sulfolobus solfataricus | |
| 3 | E, F, M (E, F, M) | Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase | polymer | 232 | 26439.4 | 3 | UniProt (P58032) Pfam (PF01269) | Sulfolobus solfataricus | FIB |
| 4 | G, H, N (G, H, N) | C/D guide RNA | polymer | 40 | 12852.7 | 3 | synthetic construct | ||
| 5 | I, J, O (I, J, O) | RNA (5'-R(*CP*CP*AP*UP*GP*AP*GP*UP*GP*U)-3') | polymer | 10 | 3177.9 | 3 | synthetic construct | ||
| 6 | P, Q, R (E, F, M) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 3 | Chemie (SAH) |
Sequence modifications
A, B, K: 1 - 380 (UniProt: Q97ZH3)
C, D, L: 1 - 130 (UniProt: D0KRE2)
E, F, M: 1 - 232 (UniProt: P58032)
| PDB | External Database | Details |
|---|---|---|
| Val 2 | Met 2 | engineered mutation |
| His 381 | - | expression tag |
| His 382 | - | expression tag |
| His 383 | - | expression tag |
| His 384 | - | expression tag |
| His 385 | - | expression tag |
| His 386 | - | expression tag |
| His 387 | - | expression tag |
| His 388 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Asp 2 | Asn 2 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Ala 2 | Ser 2 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 15 |
| Total formula weight | 302141.4 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 1153.2 | |
| All* | Total formula weight | 303294.6 |






