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3PHD

Crystal structure of human HDAC6 in complex with ubiquitin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Histone deacetylase 6polymer10712023.74UniProt (Q9UBN7)
Pfam (PF02148)
Homo sapiens (human)HD6
2E, F, G, H
(E, F, G, H)
Polyubiquitinpolymer768576.84UniProt (P62988)
Pfam (PF00240)
UniProt (by SIFTS) (P0CG47)
Homo sapiens (human)
3I, J, K, L, M...
(A, B, C, D)
ZINC IONnon-polymer65.412Chemie (ZN)
4U, V
(B, G)
waterwater18.02Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight82402.3
Non-Polymers*Number of molecules12
Total formula weight784.9
All*Total formula weight83187.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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