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3P10

Crystal structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei with cytidine and FOL694, 2-(thiophen-2-yl)phenyl methanol

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasepolymer18319487.13UniProt (Q3JRA0)
Pfam (PF02542)
Burkholderia pseudomalleiMECPS, MECDP-synthase
2D
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
3E, H, K
(A, B, C)
ZINC IONnon-polymer65.43Chemie (ZN)
4F, I, L
(A, B, C)
4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONEnon-polymer243.23Chemie (CTN)
5G
(A)
(2-thiophen-2-ylphenyl)methanolnon-polymer190.31Chemie (F69)
6J
(C)
POTASSIUM IONnon-polymer39.11Chemie (K)
7M, N, O
(A, B, C)
waterwater18.0398Chemie (HOH)
Sequence modifications
A, B, C: 1 - 162 (UniProt: Q3JRA0)
PDBExternal DatabaseDetails
Met -20-expression tag
Ala -19-expression tag
His -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
Met -12-expression tag
Gly -11-expression tag
Thr -10-expression tag
Leu -9-expression tag
Glu -8-expression tag
Ala -7-expression tag
Gln -6-expression tag
Thr -5-expression tag
Gln -4-expression tag
Gly -3-expression tag
Pro -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight58461.3
Non-Polymers*Number of molecules9
Total formula weight1190.7
All*Total formula weight59652.0
*Water molecules are not included.

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PDB entries from 2024-11-06

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