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3OPX

Crystal structure of pyrimidine 5 -nucleotidase SDT1 from Saccharomyces cerevisiae complexed with uridine 5'-monophosphate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Protein SSM1polymer26330190.71UniProt (P53078)
Pfam (PF00702)
Saccharomyces cerevisiae (yeast)SDT1 nucleotidase
2B
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
3C
(A)
URIDINE-5'-MONOPHOSPHATEnon-polymer324.21Chemie (U5P)
4D
(A)
waterwater18.0167Chemie (HOH)
Sequence modifications
A: 1 - 255 (UniProt: P53078)
PDBExternal DatabaseDetails
Ala 36Asp 61engineered mutation
Leu 256-expression tag
Glu 257-expression tag
His 258-expression tag
His 259-expression tag
His 260-expression tag
His 261-expression tag
His 262-expression tag
His 263-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight30190.7
Non-Polymers*Number of molecules2
Total formula weight348.5
All*Total formula weight30539.2
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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